
These apple cider cupcakes transform the cozy flavors of fall into a delightful handheld treat. The warm spices and rich apple flavor in both the cake and frosting create the perfect autumn dessert that happens to be gluten-free too.
I first made these cupcakes for a fall harvest party and they disappeared faster than any other dessert. Even my gluten-loving friends couldn't tell they were made with oat flour and begged for the recipe.
Ingredients
- Oat flour brings a nutty wholesome flavor while keeping these cupcakes gluten-free. Look for certified gluten-free oat flour if needed.
- Brown sugar provides a deep molasses note that complements the apple flavors perfectly.
- Apple cider not apple juice gives these cupcakes their distinctive autumn flavor. Choose a high-quality unfiltered version for the best taste.
- Applesauce adds moisture and intensifies the apple flavor while reducing the amount of fat needed.
- Warm spices cinnamon nutmeg allspice and cloves create that signature fall flavor profile. Always use fresh spices for the most vibrant taste.
- Butter in both the cupcakes and frosting provides richness but can be substituted with coconut oil or dairy-free alternatives for dietary needs.
Step-by-Step Instructions
- Combine Dry Ingredients
- Whisk together oat flour baking powder salt and all spices in a small bowl. This ensures even distribution of the leavening agents and spices throughout your batter for consistent flavor and texture in every bite.
- Create Wet Mixture
- Cream butter and brown sugar together until light and fluffy about 2 minutes. This process incorporates air into the batter for lighter cupcakes. Add applesauce apple cider and vanilla mixing until well combined then beat in eggs for a full minute to add structure.
- Form The Batter
- Gently fold dry ingredients into wet ingredients until just combined and smooth. Overmixing can develop the gluten even in gluten-free flour making your cupcakes tough rather than tender.
- Rest And Prepare
- Allow batter to rest while preheating oven to 350°F. This step is crucial when using oat flour as it needs time to absorb the liquid. Line cupcake pan with liners and spray with non-stick spray to prevent sticking.
- Bake To Perfection
- Fill cupcake liners three-quarters full for ideal rise. Bake for 18-22 minutes until tops spring back when lightly touched and a toothpick inserted comes out clean. Avoid opening the oven door during the first 15 minutes to prevent sinking.
- Create Spiced Buttercream
- Beat softened butter with apple cider vanilla and spices until smooth and creamy. Gradually add powdered sugar one cup at a time beating well after each addition until frosting is light and fluffy. Adjust consistency with additional liquid if needed.
- Frost And Finish
- Once cupcakes are completely cooled apply frosting with a piping bag or knife. For an extra touch sprinkle with cinnamon sugar or fall-colored sprinkles before serving.

The apple cider is truly the star ingredient here. I once tried substituting apple juice in a pinch and while the cupcakes were good they lacked that concentrated apple flavor that makes these so special. My daughter now requests these every year when we go apple picking and calls them our family's official autumn treat.
Make-Ahead and Storage
These cupcakes actually taste even better the day after baking as the flavors have time to meld together. Store unfrosted cupcakes in an airtight container at room temperature for up to two days. Once frosted they should be refrigerated and will last about a week. Let refrigerated cupcakes come to room temperature before serving for the best flavor and texture.
Easy Substitutions
This recipe is incredibly forgiving and adaptable. For dairy-free cupcakes substitute the butter with coconut oil or a plant-based butter alternative in both the cupcakes and frosting. Apple cider can be replaced with apple juice reduced by half on the stovetop to concentrate the flavor. For those who prefer regular wheat flour simply substitute all-purpose flour for the oat flour in equal amounts.
Seasonal Variations
While perfect for fall these cupcakes can be adapted year-round. In summer try topping with fresh berries for a lighter finish. During winter holidays add a tablespoon of bourbon to the frosting and garnish with sugared cranberries for a festive touch. In spring a light lemon glaze can replace the spiced buttercream for a brighter flavor profile.
Common Recipe Questions
- → Can I use regular flour instead of oat flour?
Yes, you can substitute regular all-purpose flour for the oat flour in equal amounts. The recipe specifically mentions that regular flour works as an alternative to the gluten-free options.
- → How can I make these cupcakes dairy-free?
To make these cupcakes dairy-free, substitute the butter with either coconut oil or a dairy-free butter alternative in the same quantities. For the frosting, use a plant-based butter and apple cider instead of milk for the liquid component.
- → What can I use instead of apple cider?
If apple cider isn't available, you can substitute with apple juice, though the flavor will be slightly less intense. In a pinch, you could use white grape juice with a dash of cinnamon and apple extract for a similar flavor profile.
- → How do I know when the cupcakes are done baking?
The cupcakes are done when the tops are springy to touch and a toothpick inserted into the center comes out clean. This typically takes 18-22 minutes at 350°F.
- → Can I freeze these cupcakes?
Yes, these cupcakes freeze well. For best results, freeze the unfrosted cupcakes in an airtight container for up to 3 months. Thaw at room temperature and add the frosting just before serving. Alternatively, you can freeze frosted cupcakes, but the texture of the frosting may change slightly upon thawing.
- → What toppings go well with the spiced buttercream?
The spiced buttercream pairs beautifully with cinnamon sugar, a light dusting of nutmeg, apple chips, caramel drizzle, chopped toasted nuts, or fall-themed sprinkles. For a special touch, a small piece of dried apple or a tiny cinnamon stick makes an elegant garnish.